Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.87■□□□□ 0.61
Rrp1P56183 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp1P56183 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.87■□□□□ 0.61
Rrp1P56183 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.87■□□□□ 0.61
Rrp1P56183 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp1P56183 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp1P56183 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp1P56183 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp1P56183 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp1P56183 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.87■□□□□ 0.61
Rrp1P56183 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.87■□□□□ 0.61
Rrp1P56183 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp1P56183 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rrp1P56183 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rrp1P56183 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rrp1P56183 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rrp1P56183 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rrp1P56183 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rrp1P56183 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.86■□□□□ 0.61
Rrp1P56183 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rrp1P56183 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rrp1P56183 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rrp1P56183 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rrp1P56183 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.86■□□□□ 0.61
Rrp1P56183 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Rrp1P56183 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rrp1P56183 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rrp1P56183 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rrp1P56183 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rrp1P56183 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.85■□□□□ 0.61
Rrp1P56183 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp1P56183 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rrp1P56183 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.84■□□□□ 0.61
Rrp1P56183 Gm8520-201ENSMUST00000186517 868 ntBASIC18.84■□□□□ 0.61
Rrp1P56183 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.84■□□□□ 0.61
Rrp1P56183 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.84■□□□□ 0.61
Rrp1P56183 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp1P56183 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rrp1P56183 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rrp1P56183 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rrp1P56183 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rrp1P56183 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rrp1P56183 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rrp1P56183 Gm13168-201ENSMUST00000121771 632 ntBASIC18.83■□□□□ 0.6
Rrp1P56183 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.83■□□□□ 0.6
Rrp1P56183 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp1P56183 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp1P56183 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.83■□□□□ 0.6
Rrp1P56183 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp1P56183 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp1P56183 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp1P56183 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.83■□□□□ 0.6
Rrp1P56183 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp1P56183 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp1P56183 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp1P56183 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.82■□□□□ 0.6
Rrp1P56183 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rrp1P56183 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms