Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.15■□□□□ 0.34
SftpbP50405 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.15■□□□□ 0.34
SftpbP50405 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SftpbP50405 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SftpbP50405 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SftpbP50405 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
SftpbP50405 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SftpbP50405 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SftpbP50405 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SftpbP50405 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SftpbP50405 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.14■□□□□ 0.33
SftpbP50405 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SftpbP50405 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SftpbP50405 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.14■□□□□ 0.33
SftpbP50405 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SftpbP50405 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.14■□□□□ 0.33
SftpbP50405 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SftpbP50405 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.14■□□□□ 0.33
SftpbP50405 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SftpbP50405 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.14■□□□□ 0.33
SftpbP50405 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SftpbP50405 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SftpbP50405 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SftpbP50405 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.13■□□□□ 0.33
SftpbP50405 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.13■□□□□ 0.33
SftpbP50405 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Gm5643-201ENSMUST00000117081 966 ntBASIC17.13■□□□□ 0.33
SftpbP50405 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.13■□□□□ 0.33
SftpbP50405 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SftpbP50405 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SftpbP50405 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SftpbP50405 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SftpbP50405 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SftpbP50405 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SftpbP50405 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SftpbP50405 Gm37025-201ENSMUST00000195159 829 ntBASIC17.12■□□□□ 0.33
SftpbP50405 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.12■□□□□ 0.33
SftpbP50405 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.12■□□□□ 0.33
SftpbP50405 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SftpbP50405 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SftpbP50405 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SftpbP50405 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.11■□□□□ 0.33
SftpbP50405 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SftpbP50405 Gm15378-201ENSMUST00000121894 207 ntBASIC17.11■□□□□ 0.33
SftpbP50405 Gm17661-201ENSMUST00000170317 270 ntBASIC17.11■□□□□ 0.33
SftpbP50405 Gm10698-201ENSMUST00000182663 604 ntBASIC17.11■□□□□ 0.33
SftpbP50405 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SftpbP50405 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.11■□□□□ 0.33
SftpbP50405 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SftpbP50405 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SftpbP50405 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SftpbP50405 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms