Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Hnf4aP49698 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Hnf4aP49698 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.19■□□□□ 0.18
Hnf4aP49698 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.19■□□□□ 0.18
Hnf4aP49698 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hnf4aP49698 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.19■□□□□ 0.18
Hnf4aP49698 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hnf4aP49698 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hnf4aP49698 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hnf4aP49698 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.18■□□□□ 0.18
Hnf4aP49698 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.18■□□□□ 0.18
Hnf4aP49698 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.18■□□□□ 0.18
Hnf4aP49698 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hnf4aP49698 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hnf4aP49698 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.17■□□□□ 0.18
Hnf4aP49698 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.17■□□□□ 0.18
Hnf4aP49698 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.17■□□□□ 0.18
Hnf4aP49698 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hnf4aP49698 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hnf4aP49698 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.16■□□□□ 0.18
Hnf4aP49698 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.16■□□□□ 0.18
Hnf4aP49698 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.16■□□□□ 0.18
Hnf4aP49698 Gm5417-201ENSMUST00000079706 384 ntBASIC16.16■□□□□ 0.18
Hnf4aP49698 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hnf4aP49698 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms