Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ercc3P49135 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc3P49135 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc3P49135 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc3P49135 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ercc3P49135 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc3P49135 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc3P49135 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ercc3P49135 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc3P49135 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc3P49135 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ercc3P49135 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.83■□□□□ 0.77
Ercc3P49135 Gm26039-201ENSMUST00000158152 144 ntBASIC19.83■□□□□ 0.77
Ercc3P49135 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.83■□□□□ 0.77
Ercc3P49135 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ercc3P49135 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ercc3P49135 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Ercc3P49135 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ercc3P49135 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.83■□□□□ 0.76
Ercc3P49135 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ercc3P49135 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.83■□□□□ 0.76
Ercc3P49135 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.83■□□□□ 0.76
Ercc3P49135 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ercc3P49135 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.82■□□□□ 0.76
Ercc3P49135 Gm10013-201ENSMUST00000106074 672 ntBASIC19.82■□□□□ 0.76
Ercc3P49135 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Gm23634-201ENSMUST00000175071 91 ntBASIC19.82■□□□□ 0.76
Ercc3P49135 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ercc3P49135 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.82■□□□□ 0.76
Ercc3P49135 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ercc3P49135 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ercc3P49135 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ercc3P49135 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ercc3P49135 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ercc3P49135 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ercc3P49135 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ercc3P49135 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ercc3P49135 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ercc3P49135 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ercc3P49135 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ercc3P49135 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ercc3P49135 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ercc3P49135 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ercc3P49135 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.81■□□□□ 0.76
Ercc3P49135 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ercc3P49135 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ercc3P49135 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ercc3P49135 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.8■□□□□ 0.76
Ercc3P49135 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ercc3P49135 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ercc3P49135 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ercc3P49135 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ercc3P49135 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ercc3P49135 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.79■□□□□ 0.76
Ercc3P49135 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.79■□□□□ 0.76
Ercc3P49135 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.79■□□□□ 0.76
Ercc3P49135 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ercc3P49135 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ercc3P49135 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ercc3P49135 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ercc3P49135 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ercc3P49135 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ercc3P49135 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Ercc3P49135 Gm27389-201ENSMUST00000183622 195 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms