Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sox18P43680 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Sox18P43680 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Sox18P43680 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.99■□□□□ 0.15
Sox18P43680 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.99■□□□□ 0.15
Sox18P43680 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.99■□□□□ 0.15
Sox18P43680 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 Rprl3-201ENSMUST00000157400 290 ntBASIC15.99■□□□□ 0.15
Sox18P43680 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.99■□□□□ 0.15
Sox18P43680 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.99■□□□□ 0.15
Sox18P43680 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.99■□□□□ 0.15
Sox18P43680 Rarb-207ENSMUST00000225921 2756 ntBASIC15.99■□□□□ 0.15
Sox18P43680 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.99■□□□□ 0.15
Sox18P43680 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox18P43680 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.99■□□□□ 0.15
Sox18P43680 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sox18P43680 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.98■□□□□ 0.15
Sox18P43680 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.98■□□□□ 0.15
Sox18P43680 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sox18P43680 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Sox18P43680 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sox18P43680 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Sox18P43680 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.97■□□□□ 0.15
Sox18P43680 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.97■□□□□ 0.15
Sox18P43680 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Sox18P43680 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.97■□□□□ 0.15
Sox18P43680 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.97■□□□□ 0.15
Sox18P43680 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.97■□□□□ 0.15
Sox18P43680 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.97■□□□□ 0.15
Sox18P43680 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Auts2-212ENSMUST00000178555 309 ntBASIC15.97■□□□□ 0.15
Sox18P43680 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.97■□□□□ 0.15
Sox18P43680 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.97■□□□□ 0.15
Sox18P43680 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.97■□□□□ 0.15
Sox18P43680 Psmb5-202ENSMUST00000227257 622 ntBASIC15.97■□□□□ 0.15
Sox18P43680 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Sox18P43680 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Sox18P43680 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.97■□□□□ 0.15
Sox18P43680 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox18P43680 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Sox18P43680 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sox18P43680 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Sox18P43680 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.96■□□□□ 0.15
Sox18P43680 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.96■□□□□ 0.15
Sox18P43680 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox18P43680 Idnk-204ENSMUST00000226010 1898 ntBASIC15.96■□□□□ 0.15
Sox18P43680 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Sox18P43680 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Sox18P43680 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sox18P43680 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox18P43680 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms