Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mmp9P41245 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
Mmp9P41245 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Gm5408-201ENSMUST00000197998 747 ntBASIC14.07□□□□□ -0.16
Mmp9P41245 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Mmp9P41245 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.07□□□□□ -0.16
Mmp9P41245 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Mmp9P41245 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.07□□□□□ -0.16
Mmp9P41245 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Mmp9P41245 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Mmp9P41245 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.06□□□□□ -0.16
Mmp9P41245 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.06□□□□□ -0.16
Mmp9P41245 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.06□□□□□ -0.16
Mmp9P41245 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.06□□□□□ -0.16
Mmp9P41245 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Mmp9P41245 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.06□□□□□ -0.16
Mmp9P41245 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.06□□□□□ -0.16
Mmp9P41245 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.06□□□□□ -0.16
Mmp9P41245 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Mmp9P41245 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.05□□□□□ -0.16
Mmp9P41245 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.05□□□□□ -0.16
Mmp9P41245 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.05□□□□□ -0.16
Mmp9P41245 Gm10812-201ENSMUST00000099864 546 ntBASIC14.05□□□□□ -0.16
Mmp9P41245 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.05□□□□□ -0.16
Mmp9P41245 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Mmp9P41245 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.05□□□□□ -0.16
Mmp9P41245 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Mmp9P41245 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Mmp9P41245 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Mmp9P41245 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.04□□□□□ -0.16
Mmp9P41245 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Mmp9P41245 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Mmp9P41245 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.04□□□□□ -0.16
Mmp9P41245 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Mmp9P41245 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms