Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn1aP39689 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdkn1aP39689 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdkn1aP39689 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.8□□□□□ -0.2
Cdkn1aP39689 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cdkn1aP39689 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdkn1aP39689 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.79□□□□□ -0.2
Cdkn1aP39689 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cdkn1aP39689 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.78□□□□□ -0.2
Cdkn1aP39689 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Gm17807-201ENSMUST00000186869 298 ntBASIC13.78□□□□□ -0.2
Cdkn1aP39689 Gm45328-201ENSMUST00000210942 917 ntBASIC13.78□□□□□ -0.2
Cdkn1aP39689 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdkn1aP39689 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.77□□□□□ -0.21
Cdkn1aP39689 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdkn1aP39689 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms