Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Rfc1P35601 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.66■□□□□ 0.42
Rfc1P35601 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.66■□□□□ 0.42
Rfc1P35601 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.66■□□□□ 0.42
Rfc1P35601 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Rfc1P35601 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rfc1P35601 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfc1P35601 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Rfc1P35601 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfc1P35601 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rfc1P35601 Gm13148-201ENSMUST00000118892 745 ntBASIC17.65■□□□□ 0.42
Rfc1P35601 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.65■□□□□ 0.42
Rfc1P35601 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfc1P35601 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rfc1P35601 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfc1P35601 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rfc1P35601 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc1P35601 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rfc1P35601 Gm37179-201ENSMUST00000194862 823 ntBASIC17.64■□□□□ 0.41
Rfc1P35601 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.64■□□□□ 0.41
Rfc1P35601 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc1P35601 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rfc1P35601 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc1P35601 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc1P35601 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc1P35601 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Rfc1P35601 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc1P35601 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc1P35601 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfc1P35601 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfc1P35601 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfc1P35601 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rfc1P35601 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfc1P35601 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Rfc1P35601 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.63■□□□□ 0.41
Rfc1P35601 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rfc1P35601 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfc1P35601 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Rfc1P35601 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Mir5133-201ENSMUST00000174955 77 ntBASIC17.62■□□□□ 0.41
Rfc1P35601 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.62■□□□□ 0.41
Rfc1P35601 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.62■□□□□ 0.41
Rfc1P35601 Gm29791-202ENSMUST00000207888 369 ntBASIC17.62■□□□□ 0.41
Rfc1P35601 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.62■□□□□ 0.41
Rfc1P35601 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfc1P35601 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.62■□□□□ 0.41
Rfc1P35601 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rfc1P35601 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc1P35601 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfc1P35601 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms