Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Slc6a11P31650 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.88■□□□□ 0.13
Slc6a11P31650 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.88■□□□□ 0.13
Slc6a11P31650 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Slc6a11P31650 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Slc6a11P31650 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Slc6a11P31650 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.87■□□□□ 0.13
Slc6a11P31650 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.87■□□□□ 0.13
Slc6a11P31650 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.87■□□□□ 0.13
Slc6a11P31650 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Slc6a11P31650 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a11P31650 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Slc6a11P31650 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Slc6a11P31650 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Slc6a11P31650 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.86■□□□□ 0.13
Slc6a11P31650 Gm21814-202ENSMUST00000203277 873 ntBASIC15.86■□□□□ 0.13
Slc6a11P31650 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Slc6a11P31650 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Slc6a11P31650 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Slc6a11P31650 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a11P31650 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.85■□□□□ 0.13
Slc6a11P31650 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.85■□□□□ 0.13
Slc6a11P31650 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.85■□□□□ 0.13
Slc6a11P31650 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.85■□□□□ 0.13
Slc6a11P31650 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a11P31650 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a11P31650 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a11P31650 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.84■□□□□ 0.13
Slc6a11P31650 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.84■□□□□ 0.13
Slc6a11P31650 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a11P31650 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Slc6a11P31650 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.84■□□□□ 0.13
Slc6a11P31650 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.84■□□□□ 0.13
Slc6a11P31650 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms