Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gm22697-201ENSMUST00000175194 63 ntBASIC16.98■□□□□ 0.31
Slc6a13P31649 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.98■□□□□ 0.31
Slc6a13P31649 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.98■□□□□ 0.31
Slc6a13P31649 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a13P31649 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Slc6a13P31649 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.98■□□□□ 0.31
Slc6a13P31649 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a13P31649 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Slc6a13P31649 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a13P31649 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a13P31649 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Slc6a13P31649 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a13P31649 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a13P31649 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a13P31649 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a13P31649 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a13P31649 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Slc6a13P31649 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Slc6a13P31649 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a13P31649 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc6a13P31649 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Slc6a13P31649 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Slc6a13P31649 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Slc6a13P31649 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.96■□□□□ 0.31
Slc6a13P31649 Gm21559-201ENSMUST00000220638 855 ntBASIC16.96■□□□□ 0.31
Slc6a13P31649 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Slc6a13P31649 Gm8587-201ENSMUST00000076538 843 ntBASIC16.96■□□□□ 0.31
Slc6a13P31649 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.96■□□□□ 0.31
Slc6a13P31649 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.96■□□□□ 0.31
Slc6a13P31649 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a13P31649 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Slc6a13P31649 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Slc6a13P31649 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Gm44450-201ENSMUST00000199528 114 ntBASIC16.95■□□□□ 0.3
Slc6a13P31649 Gm18101-201ENSMUST00000215769 548 ntBASIC16.95■□□□□ 0.3
Slc6a13P31649 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slc6a13P31649 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Slc6a13P31649 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.95■□□□□ 0.3
Slc6a13P31649 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a13P31649 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Slc6a13P31649 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.94■□□□□ 0.3
Slc6a13P31649 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slc6a13P31649 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.94■□□□□ 0.3
Slc6a13P31649 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.94■□□□□ 0.3
Slc6a13P31649 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Slc6a13P31649 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.94■□□□□ 0.3
Slc6a13P31649 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.94■□□□□ 0.3
Slc6a13P31649 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.94■□□□□ 0.3
Slc6a13P31649 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a13P31649 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a13P31649 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a13P31649 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a13P31649 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a13P31649 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a13P31649 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a13P31649 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a13P31649 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a13P31649 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms