Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vcam1P29533 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.2■□□□□ 0.66
Vcam1P29533 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcam1P29533 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.2■□□□□ 0.66
Vcam1P29533 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Vcam1P29533 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.19■□□□□ 0.66
Vcam1P29533 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.19■□□□□ 0.66
Vcam1P29533 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Vcam1P29533 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Vcam1P29533 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.19■□□□□ 0.66
Vcam1P29533 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Vcam1P29533 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Vcam1P29533 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcam1P29533 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.18■□□□□ 0.66
Vcam1P29533 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.18■□□□□ 0.66
Vcam1P29533 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vcam1P29533 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Vcam1P29533 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcam1P29533 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcam1P29533 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Vcam1P29533 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.18■□□□□ 0.66
Vcam1P29533 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.18■□□□□ 0.66
Vcam1P29533 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcam1P29533 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Vcam1P29533 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcam1P29533 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Vcam1P29533 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcam1P29533 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcam1P29533 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Vcam1P29533 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcam1P29533 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcam1P29533 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vcam1P29533 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Vcam1P29533 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.17■□□□□ 0.66
Vcam1P29533 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.17■□□□□ 0.66
Vcam1P29533 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44357-201ENSMUST00000195897 142 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm19658-201ENSMUST00000196231 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44367-201ENSMUST00000196836 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44350-201ENSMUST00000197197 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44390-201ENSMUST00000197533 144 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44313-201ENSMUST00000198018 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44486-201ENSMUST00000198508 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44314-201ENSMUST00000199263 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44394-201ENSMUST00000199558 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44484-201ENSMUST00000199873 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44466-201ENSMUST00000200264 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Gm44359-201ENSMUST00000200671 138 ntBASIC19.17■□□□□ 0.66
Vcam1P29533 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.17■□□□□ 0.66
Vcam1P29533 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcam1P29533 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Vcam1P29533 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Vcam1P29533 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcam1P29533 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Vcam1P29533 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.17■□□□□ 0.66
Vcam1P29533 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcam1P29533 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.16■□□□□ 0.66
Vcam1P29533 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Vcam1P29533 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.16■□□□□ 0.66
Vcam1P29533 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcam1P29533 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Vcam1P29533 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Vcam1P29533 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.15■□□□□ 0.66
Vcam1P29533 Gm6296-201ENSMUST00000222599 943 ntBASIC19.15■□□□□ 0.66
Vcam1P29533 Rps4l-201ENSMUST00000071745 943 ntBASIC19.15■□□□□ 0.66
Vcam1P29533 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Vcam1P29533 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcam1P29533 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms