Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.89■□□□□ 0.45
Mmp3P28862 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Gm7729-201ENSMUST00000050143 801 ntBASIC17.89■□□□□ 0.45
Mmp3P28862 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.89■□□□□ 0.45
Mmp3P28862 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.89■□□□□ 0.45
Mmp3P28862 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp3P28862 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.88■□□□□ 0.45
Mmp3P28862 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.88■□□□□ 0.45
Mmp3P28862 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.88■□□□□ 0.45
Mmp3P28862 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp3P28862 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.87■□□□□ 0.45
Mmp3P28862 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.87■□□□□ 0.45
Mmp3P28862 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.87■□□□□ 0.45
Mmp3P28862 Gm27459-201ENSMUST00000184860 107 ntBASIC17.87■□□□□ 0.45
Mmp3P28862 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.87■□□□□ 0.45
Mmp3P28862 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Mmp3P28862 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp3P28862 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.87■□□□□ 0.45
Mmp3P28862 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp3P28862 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
Mmp3P28862 Gm13312-201ENSMUST00000119631 718 ntBASIC17.86■□□□□ 0.45
Mmp3P28862 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.86■□□□□ 0.45
Mmp3P28862 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Mmp3P28862 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Mmp3P28862 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.86■□□□□ 0.45
Mmp3P28862 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp3P28862 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp3P28862 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Mmp3P28862 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp3P28862 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.85■□□□□ 0.45
Mmp3P28862 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp3P28862 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.85■□□□□ 0.45
Mmp3P28862 Gm15372-201ENSMUST00000120729 834 ntBASIC17.85■□□□□ 0.45
Mmp3P28862 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.85■□□□□ 0.45
Mmp3P28862 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp3P28862 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp3P28862 Gm44430-201ENSMUST00000203376 995 ntBASIC17.85■□□□□ 0.45
Mmp3P28862 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.85■□□□□ 0.45
Mmp3P28862 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp3P28862 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp3P28862 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.84■□□□□ 0.45
Mmp3P28862 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp3P28862 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp3P28862 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp3P28862 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp3P28862 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp3P28862 Gm43347-201ENSMUST00000200226 580 ntBASIC17.84■□□□□ 0.45
Mmp3P28862 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.84■□□□□ 0.45
Mmp3P28862 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Mmp3P28862 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Mmp3P28862 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp3P28862 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp3P28862 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp3P28862 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms