Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nckap1P28660 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nckap1P28660 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.64■□□□□ 0.25
Nckap1P28660 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.64■□□□□ 0.25
Nckap1P28660 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nckap1P28660 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nckap1P28660 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.64■□□□□ 0.25
Nckap1P28660 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Nckap1P28660 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nckap1P28660 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nckap1P28660 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Nckap1P28660 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nckap1P28660 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nckap1P28660 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nckap1P28660 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nckap1P28660 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nckap1P28660 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nckap1P28660 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nckap1P28660 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.63■□□□□ 0.25
Nckap1P28660 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.63■□□□□ 0.25
Nckap1P28660 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Olfr129-201ENSMUST00000122318 993 ntBASIC16.63■□□□□ 0.25
Nckap1P28660 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.63■□□□□ 0.25
Nckap1P28660 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.63■□□□□ 0.25
Nckap1P28660 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.63■□□□□ 0.25
Nckap1P28660 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.63■□□□□ 0.25
Nckap1P28660 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.63■□□□□ 0.25
Nckap1P28660 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Nckap1P28660 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nckap1P28660 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.62■□□□□ 0.25
Nckap1P28660 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Nckap1P28660 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nckap1P28660 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.62■□□□□ 0.25
Nckap1P28660 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.62■□□□□ 0.25
Nckap1P28660 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.62■□□□□ 0.25
Nckap1P28660 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.62■□□□□ 0.25
Nckap1P28660 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Nckap1P28660 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nckap1P28660 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nckap1P28660 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nckap1P28660 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nckap1P28660 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nckap1P28660 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nckap1P28660 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nckap1P28660 Gm15794-201ENSMUST00000120182 631 ntBASIC16.61■□□□□ 0.25
Nckap1P28660 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nckap1P28660 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nckap1P28660 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nckap1P28660 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nckap1P28660 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nckap1P28660 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nckap1P28660 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nckap1P28660 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Nckap1P28660 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.6■□□□□ 0.25
Nckap1P28660 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Nckap1P28660 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.6■□□□□ 0.25
Nckap1P28660 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.6■□□□□ 0.25
Nckap1P28660 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.6■□□□□ 0.25
Nckap1P28660 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.6■□□□□ 0.25
Nckap1P28660 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.6■□□□□ 0.25
Nckap1P28660 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nckap1P28660 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.6■□□□□ 0.25
Nckap1P28660 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Nckap1P28660 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.59■□□□□ 0.25
Nckap1P28660 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.59■□□□□ 0.25
Nckap1P28660 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms