Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Nfkb1P25799 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nfkb1P25799 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Nfkb1P25799 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nfkb1P25799 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nfkb1P25799 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.17■□□□□ 0.34
Nfkb1P25799 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Nfkb1P25799 Gm18115-201ENSMUST00000221209 621 ntBASIC17.17■□□□□ 0.34
Nfkb1P25799 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nfkb1P25799 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Nfkb1P25799 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nfkb1P25799 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nfkb1P25799 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.16■□□□□ 0.34
Nfkb1P25799 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nfkb1P25799 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.16■□□□□ 0.34
Nfkb1P25799 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.16■□□□□ 0.34
Nfkb1P25799 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.16■□□□□ 0.34
Nfkb1P25799 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nfkb1P25799 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nfkb1P25799 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nfkb1P25799 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nfkb1P25799 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nfkb1P25799 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nfkb1P25799 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nfkb1P25799 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.15■□□□□ 0.34
Nfkb1P25799 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.15■□□□□ 0.34
Nfkb1P25799 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.15■□□□□ 0.34
Nfkb1P25799 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nfkb1P25799 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.15■□□□□ 0.34
Nfkb1P25799 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nfkb1P25799 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Nfkb1P25799 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nfkb1P25799 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.14■□□□□ 0.34
Nfkb1P25799 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nfkb1P25799 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nfkb1P25799 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.14■□□□□ 0.33
Nfkb1P25799 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Gm15794-201ENSMUST00000120182 631 ntBASIC17.14■□□□□ 0.33
Nfkb1P25799 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.14■□□□□ 0.33
Nfkb1P25799 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nfkb1P25799 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.14■□□□□ 0.33
Nfkb1P25799 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.14■□□□□ 0.33
Nfkb1P25799 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nfkb1P25799 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms