Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Gm7514-201ENSMUST00000209475 934 ntBASIC18.81■□□□□ 0.6
Tpm3P21107 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tpm3P21107 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tpm3P21107 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tpm3P21107 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.8■□□□□ 0.6
Tpm3P21107 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.8■□□□□ 0.6
Tpm3P21107 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tpm3P21107 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tpm3P21107 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tpm3P21107 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.79■□□□□ 0.6
Tpm3P21107 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tpm3P21107 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tpm3P21107 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Gm10493-201ENSMUST00000097270 612 ntBASIC18.79■□□□□ 0.6
Tpm3P21107 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.79■□□□□ 0.6
Tpm3P21107 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tpm3P21107 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tpm3P21107 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.78■□□□□ 0.6
Tpm3P21107 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tpm3P21107 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.78■□□□□ 0.6
Tpm3P21107 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.78■□□□□ 0.6
Tpm3P21107 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.78■□□□□ 0.6
Tpm3P21107 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.78■□□□□ 0.6
Tpm3P21107 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.78■□□□□ 0.6
Tpm3P21107 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tpm3P21107 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.77■□□□□ 0.6
Tpm3P21107 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.77■□□□□ 0.6
Tpm3P21107 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Tpm3P21107 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tpm3P21107 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tpm3P21107 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tpm3P21107 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Tpm3P21107 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tpm3P21107 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Tpm3P21107 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tpm3P21107 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.76■□□□□ 0.59
Tpm3P21107 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Tpm3P21107 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.76■□□□□ 0.59
Tpm3P21107 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Mir2861-201ENSMUST00000175539 82 ntBASIC18.76■□□□□ 0.59
Tpm3P21107 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.76■□□□□ 0.59
Tpm3P21107 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tpm3P21107 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tpm3P21107 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tpm3P21107 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Tpm3P21107 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Tpm3P21107 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms