Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga1P17095 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga1P17095 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga1P17095 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga1P17095 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hmga1P17095 Gm13312-201ENSMUST00000119631 718 ntBASIC17.06■□□□□ 0.32
Hmga1P17095 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.06■□□□□ 0.32
Hmga1P17095 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.06■□□□□ 0.32
Hmga1P17095 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga1P17095 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga1P17095 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.06■□□□□ 0.32
Hmga1P17095 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga1P17095 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.06■□□□□ 0.32
Hmga1P17095 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Hmga1P17095 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hmga1P17095 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Hmga1P17095 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.05■□□□□ 0.32
Hmga1P17095 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hmga1P17095 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hmga1P17095 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Hmga1P17095 Gm15372-201ENSMUST00000120729 834 ntBASIC17.05■□□□□ 0.32
Hmga1P17095 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.05■□□□□ 0.32
Hmga1P17095 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hmga1P17095 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmga1P17095 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmga1P17095 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hmga1P17095 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmga1P17095 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hmga1P17095 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmga1P17095 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hmga1P17095 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmga1P17095 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hmga1P17095 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.03■□□□□ 0.32
Hmga1P17095 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.03■□□□□ 0.32
Hmga1P17095 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hmga1P17095 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmga1P17095 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.02■□□□□ 0.32
Hmga1P17095 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.02■□□□□ 0.32
Hmga1P17095 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hmga1P17095 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hmga1P17095 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Hmga1P17095 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Hmga1P17095 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Hmga1P17095 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.02■□□□□ 0.32
Hmga1P17095 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.02■□□□□ 0.32
Hmga1P17095 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.02■□□□□ 0.32
Hmga1P17095 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.02■□□□□ 0.32
Hmga1P17095 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmga1P17095 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmga1P17095 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Hmga1P17095 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmga1P17095 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmga1P17095 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms