Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.08■□□□□ 0.32
Rb1P13405 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.08■□□□□ 0.32
Rb1P13405 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.08■□□□□ 0.32
Rb1P13405 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rb1P13405 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rb1P13405 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rb1P13405 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rb1P13405 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rb1P13405 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Rb1P13405 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rb1P13405 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rb1P13405 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rb1P13405 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.07■□□□□ 0.32
Rb1P13405 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rb1P13405 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rb1P13405 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rb1P13405 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.06■□□□□ 0.32
Rb1P13405 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.06■□□□□ 0.32
Rb1P13405 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rb1P13405 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Gm17971-201ENSMUST00000190239 806 ntBASIC17.06■□□□□ 0.32
Rb1P13405 Gm37025-201ENSMUST00000195159 829 ntBASIC17.06■□□□□ 0.32
Rb1P13405 Gm7370-201ENSMUST00000219471 767 ntBASIC17.06■□□□□ 0.32
Rb1P13405 Il3ra-202ENSMUST00000223589 738 ntBASIC17.06■□□□□ 0.32
Rb1P13405 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.06■□□□□ 0.32
Rb1P13405 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.06■□□□□ 0.32
Rb1P13405 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rb1P13405 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rb1P13405 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.05■□□□□ 0.32
Rb1P13405 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rb1P13405 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rb1P13405 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.05■□□□□ 0.32
Rb1P13405 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rb1P13405 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rb1P13405 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rb1P13405 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.05■□□□□ 0.32
Rb1P13405 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Rb1P13405 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.04■□□□□ 0.32
Rb1P13405 Gm29518-201ENSMUST00000190858 372 ntBASIC17.04■□□□□ 0.32
Rb1P13405 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.04■□□□□ 0.32
Rb1P13405 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Gm9731-201ENSMUST00000209480 747 ntBASIC17.04■□□□□ 0.32
Rb1P13405 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Rb1P13405 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rb1P13405 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rb1P13405 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rb1P13405 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Gm11355-201ENSMUST00000121120 306 ntBASIC17.03■□□□□ 0.32
Rb1P13405 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.03■□□□□ 0.32
Rb1P13405 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rb1P13405 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rb1P13405 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms