Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxc6P10629 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxc6P10629 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hoxc6P10629 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxc6P10629 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxc6P10629 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxc6P10629 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.54■□□□□ 0.56
Hoxc6P10629 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxc6P10629 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.54■□□□□ 0.56
Hoxc6P10629 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hoxc6P10629 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.53■□□□□ 0.56
Hoxc6P10629 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.53■□□□□ 0.56
Hoxc6P10629 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.53■□□□□ 0.56
Hoxc6P10629 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.53■□□□□ 0.56
Hoxc6P10629 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hoxc6P10629 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc6P10629 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc6P10629 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Hoxc6P10629 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.52■□□□□ 0.56
Hoxc6P10629 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.52■□□□□ 0.56
Hoxc6P10629 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.52■□□□□ 0.56
Hoxc6P10629 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc6P10629 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hoxc6P10629 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc6P10629 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc6P10629 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc6P10629 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc6P10629 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hoxc6P10629 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.51■□□□□ 0.55
Hoxc6P10629 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hoxc6P10629 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hoxc6P10629 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hoxc6P10629 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hoxc6P10629 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.5■□□□□ 0.55
Hoxc6P10629 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.5■□□□□ 0.55
Hoxc6P10629 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.5■□□□□ 0.55
Hoxc6P10629 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hoxc6P10629 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Hoxc6P10629 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Hoxc6P10629 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Hoxc6P10629 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.49■□□□□ 0.55
Hoxc6P10629 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Mir5126-201ENSMUST00000175513 77 ntBASIC18.49■□□□□ 0.55
Hoxc6P10629 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Gm8000-201ENSMUST00000188378 592 ntBASIC18.49■□□□□ 0.55
Hoxc6P10629 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hoxc6P10629 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hoxc6P10629 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hoxc6P10629 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hoxc6P10629 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hoxc6P10629 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxc6P10629 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxc6P10629 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.48■□□□□ 0.55
Hoxc6P10629 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Hoxc6P10629 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hoxc6P10629 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.48■□□□□ 0.55
Hoxc6P10629 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxc6P10629 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms