Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nid1P10493 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.68■□□□□ 0.1
Nid1P10493 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.68■□□□□ 0.1
Nid1P10493 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Gm27011-201ENSMUST00000182352 972 ntBASIC15.68■□□□□ 0.1
Nid1P10493 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.68■□□□□ 0.1
Nid1P10493 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.68■□□□□ 0.1
Nid1P10493 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.68■□□□□ 0.1
Nid1P10493 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Nid1P10493 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Nid1P10493 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nid1P10493 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nid1P10493 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nid1P10493 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nid1P10493 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.67■□□□□ 0.1
Nid1P10493 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.67■□□□□ 0.1
Nid1P10493 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.67■□□□□ 0.1
Nid1P10493 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.67■□□□□ 0.1
Nid1P10493 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nid1P10493 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.67■□□□□ 0.1
Nid1P10493 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.67■□□□□ 0.1
Nid1P10493 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nid1P10493 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nid1P10493 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nid1P10493 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.66■□□□□ 0.1
Nid1P10493 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nid1P10493 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.66■□□□□ 0.1
Nid1P10493 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Nid1P10493 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.66■□□□□ 0.1
Nid1P10493 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nid1P10493 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nid1P10493 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nid1P10493 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nid1P10493 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nid1P10493 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Gm13186-201ENSMUST00000118031 316 ntBASIC15.65■□□□□ 0.1
Nid1P10493 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nid1P10493 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.65■□□□□ 0.1
Nid1P10493 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.65■□□□□ 0.1
Nid1P10493 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nid1P10493 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nid1P10493 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Nid1P10493 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nid1P10493 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nid1P10493 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nid1P10493 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms