Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.57□□□□□ -0.08
UbbP0CG49 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
UbbP0CG49 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
UbbP0CG49 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.56□□□□□ -0.08
UbbP0CG49 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
UbbP0CG49 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
UbbP0CG49 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
UbbP0CG49 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UbbP0CG49 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UbbP0CG49 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
UbbP0CG49 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.55□□□□□ -0.08
UbbP0CG49 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UbbP0CG49 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UbbP0CG49 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.55□□□□□ -0.08
UbbP0CG49 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Gm18025-201ENSMUST00000221733 862 ntBASIC14.55□□□□□ -0.08
UbbP0CG49 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
UbbP0CG49 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.55□□□□□ -0.08
UbbP0CG49 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UbbP0CG49 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.54□□□□□ -0.08
UbbP0CG49 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Gm11249-201ENSMUST00000117071 859 ntBASIC14.54□□□□□ -0.08
UbbP0CG49 Gm12896-201ENSMUST00000118430 226 ntBASIC14.54□□□□□ -0.08
UbbP0CG49 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
UbbP0CG49 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.54□□□□□ -0.08
UbbP0CG49 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.54□□□□□ -0.08
UbbP0CG49 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.54□□□□□ -0.08
UbbP0CG49 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.54□□□□□ -0.08
UbbP0CG49 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UbbP0CG49 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
UbbP0CG49 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.53□□□□□ -0.08
UbbP0CG49 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
UbbP0CG49 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.53□□□□□ -0.08
UbbP0CG49 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
UbbP0CG49 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
UbbP0CG49 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
UbbP0CG49 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UbbP0CG49 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms