Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NeflP08551 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NeflP08551 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NeflP08551 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
NeflP08551 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NeflP08551 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.78■■□□□ 1.08
NeflP08551 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
NeflP08551 Dio3-201ENSMUST00000097228 1449 ntBASIC21.78■■□□□ 1.08
NeflP08551 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NeflP08551 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
NeflP08551 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NeflP08551 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.77■■□□□ 1.08
NeflP08551 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NeflP08551 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NeflP08551 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NeflP08551 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
NeflP08551 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NeflP08551 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NeflP08551 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NeflP08551 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NeflP08551 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Gm8495-201ENSMUST00000188740 694 ntBASIC21.76■■□□□ 1.07
NeflP08551 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.76■■□□□ 1.07
NeflP08551 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.76■■□□□ 1.07
NeflP08551 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NeflP08551 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NeflP08551 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.76■■□□□ 1.07
NeflP08551 Gm37812-201ENSMUST00000195216 2475 ntBASIC21.75■■□□□ 1.07
NeflP08551 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NeflP08551 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.75■■□□□ 1.07
NeflP08551 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Gm12896-201ENSMUST00000118430 226 ntBASIC21.75■■□□□ 1.07
NeflP08551 Gm12933-201ENSMUST00000120203 872 ntBASIC21.75■■□□□ 1.07
NeflP08551 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.75■■□□□ 1.07
NeflP08551 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.75■■□□□ 1.07
NeflP08551 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NeflP08551 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NeflP08551 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
NeflP08551 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NeflP08551 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NeflP08551 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NeflP08551 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms