Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
P04214 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.5■□□□□ 0.39
P04214 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.5■□□□□ 0.39
P04214 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
P04214 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.5■□□□□ 0.39
P04214 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.5■□□□□ 0.39
P04214 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.5■□□□□ 0.39
P04214 Gm6550-201ENSMUST00000187574 993 ntBASIC17.5■□□□□ 0.39
P04214 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04214 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.49■□□□□ 0.39
P04214 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
P04214 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
P04214 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.49■□□□□ 0.39
P04214 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.49■□□□□ 0.39
P04214 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
P04214 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.49■□□□□ 0.39
P04214 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.49■□□□□ 0.39
P04214 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.49■□□□□ 0.39
P04214 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.49■□□□□ 0.39
P04214 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P04214 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Gm13036-201ENSMUST00000117799 748 ntBASIC17.48■□□□□ 0.39
P04214 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.48■□□□□ 0.39
P04214 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Gm11780-201ENSMUST00000136880 516 ntBASIC17.48■□□□□ 0.39
P04214 Gm9727-201ENSMUST00000161387 555 ntBASIC17.48■□□□□ 0.39
P04214 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Gm24513-201ENSMUST00000174964 138 ntBASIC17.48■□□□□ 0.39
P04214 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Gm27628-201ENSMUST00000184911 107 ntBASIC17.48■□□□□ 0.39
P04214 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
P04214 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04214 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
P04214 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.47■□□□□ 0.39
P04214 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.47■□□□□ 0.39
P04214 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.47■□□□□ 0.39
P04214 Gm27397-201ENSMUST00000184997 107 ntBASIC17.47■□□□□ 0.39
P04214 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.47■□□□□ 0.39
P04214 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
P04214 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.47■□□□□ 0.39
P04214 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
P04214 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.47■□□□□ 0.39
P04214 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.47■□□□□ 0.39
P04214 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04214 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04214 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04214 Gm8097-201ENSMUST00000117903 829 ntBASIC17.46■□□□□ 0.39
P04214 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.46■□□□□ 0.39
P04214 Gm12497-201ENSMUST00000138778 237 ntBASIC17.46■□□□□ 0.39
P04214 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
P04214 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.46■□□□□ 0.39
P04214 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.46■□□□□ 0.39
P04214 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04214 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04214 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.46■□□□□ 0.39
P04214 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04214 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04214 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
P04214 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
P04214 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
P04214 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms