Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
H3f3cP02301 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3cP02301 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3cP02301 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3cP02301 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3cP02301 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3cP02301 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
H3f3cP02301 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
H3f3cP02301 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
H3f3cP02301 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.35□□□□□ -0.11
H3f3cP02301 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Gm16061-201ENSMUST00000122167 857 ntBASIC14.35□□□□□ -0.11
H3f3cP02301 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.35□□□□□ -0.11
H3f3cP02301 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
H3f3cP02301 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.35□□□□□ -0.11
H3f3cP02301 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
H3f3cP02301 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3f3cP02301 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
H3f3cP02301 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H3f3cP02301 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H3f3cP02301 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Gm13474-201ENSMUST00000122466 815 ntBASIC14.34□□□□□ -0.11
H3f3cP02301 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H3f3cP02301 Gm7889-201ENSMUST00000185591 958 ntBASIC14.34□□□□□ -0.11
H3f3cP02301 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.34□□□□□ -0.11
H3f3cP02301 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H3f3cP02301 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.34□□□□□ -0.11
H3f3cP02301 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.34□□□□□ -0.11
H3f3cP02301 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3f3cP02301 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
H3f3cP02301 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H3f3cP02301 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
H3f3cP02301 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.33□□□□□ -0.12
H3f3cP02301 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.33□□□□□ -0.12
H3f3cP02301 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.33□□□□□ -0.12
H3f3cP02301 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.33□□□□□ -0.12
H3f3cP02301 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.33□□□□□ -0.12
H3f3cP02301 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H3f3cP02301 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3f3cP02301 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H3f3cP02301 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Gm27000-201ENSMUST00000182943 842 ntBASIC14.32□□□□□ -0.12
H3f3cP02301 Gm7370-201ENSMUST00000219471 767 ntBASIC14.32□□□□□ -0.12
H3f3cP02301 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H3f3cP02301 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3f3cP02301 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.32□□□□□ -0.12
H3f3cP02301 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms