Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P01852 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.28■□□□□ 0.04
P01852 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.28■□□□□ 0.04
P01852 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
P01852 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01852 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.28■□□□□ 0.04
P01852 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P01852 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.28■□□□□ 0.04
P01852 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01852 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01852 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01852 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P01852 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
P01852 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
P01852 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.27■□□□□ 0.04
P01852 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
P01852 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Gm27389-201ENSMUST00000183622 195 ntBASIC15.27■□□□□ 0.04
P01852 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.27■□□□□ 0.04
P01852 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P01852 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
P01852 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
P01852 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
P01852 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
P01852 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
P01852 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.26■□□□□ 0.03
P01852 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
P01852 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.26■□□□□ 0.03
P01852 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
P01852 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
P01852 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
P01852 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
P01852 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P01852 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P01852 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.25■□□□□ 0.03
P01852 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P01852 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.25■□□□□ 0.03
P01852 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.25■□□□□ 0.03
P01852 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.25■□□□□ 0.03
P01852 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01852 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P01852 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01852 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01852 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
P01852 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
P01852 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
P01852 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01852 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01852 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01852 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P01852 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P01852 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.24■□□□□ 0.03
P01852 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.24■□□□□ 0.03
P01852 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
P01852 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.24■□□□□ 0.03
P01852 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.24■□□□□ 0.03
P01852 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms