Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
TcraP01849 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
TcraP01849 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TcraP01849 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.26□□□□□ -0.45
TcraP01849 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TcraP01849 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.26□□□□□ -0.45
TcraP01849 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
TcraP01849 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.26□□□□□ -0.45
TcraP01849 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.26□□□□□ -0.45
TcraP01849 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.26□□□□□ -0.45
TcraP01849 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.26□□□□□ -0.45
TcraP01849 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
TcraP01849 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TcraP01849 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.25□□□□□ -0.45
TcraP01849 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
TcraP01849 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.25□□□□□ -0.45
TcraP01849 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TcraP01849 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.24□□□□□ -0.45
TcraP01849 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TcraP01849 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.24□□□□□ -0.45
TcraP01849 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.24□□□□□ -0.45
TcraP01849 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TcraP01849 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TcraP01849 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Gm5874-201ENSMUST00000096101 508 ntBASIC12.24□□□□□ -0.45
TcraP01849 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TcraP01849 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TcraP01849 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TcraP01849 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TcraP01849 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TcraP01849 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
TcraP01849 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms