Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Ifna1P01572 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ifna1P01572 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.14□□□□□ -0.15
Ifna1P01572 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ifna1P01572 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.13□□□□□ -0.15
Ifna1P01572 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ifna1P01572 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.13□□□□□ -0.15
Ifna1P01572 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.13□□□□□ -0.15
Ifna1P01572 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.13□□□□□ -0.15
Ifna1P01572 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.13□□□□□ -0.15
Ifna1P01572 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ifna1P01572 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ifna1P01572 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ifna1P01572 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ifna1P01572 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.12□□□□□ -0.15
Ifna1P01572 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ifna1P01572 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ifna1P01572 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ifna1P01572 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ifna1P01572 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ifna1P01572 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.12□□□□□ -0.15
Ifna1P01572 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.12□□□□□ -0.15
Ifna1P01572 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Ifna1P01572 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ifna1P01572 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.11□□□□□ -0.15
Ifna1P01572 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ifna1P01572 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.11□□□□□ -0.15
Ifna1P01572 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.11□□□□□ -0.15
Ifna1P01572 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.11□□□□□ -0.15
Ifna1P01572 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.11□□□□□ -0.15
Ifna1P01572 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.11□□□□□ -0.15
Ifna1P01572 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ifna1P01572 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms