Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.14■□□□□ 0.01
Abcd4O89016 Gm9013-201ENSMUST00000132939 882 ntBASIC15.14■□□□□ 0.01
Abcd4O89016 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.14■□□□□ 0.01
Abcd4O89016 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.14■□□□□ 0.01
Abcd4O89016 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Idnk-204ENSMUST00000226010 1898 ntBASIC15.14■□□□□ 0.01
Abcd4O89016 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Abcd4O89016 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Abcd4O89016 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.13■□□□□ 0.01
Abcd4O89016 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Abcd4O89016 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.13■□□□□ 0.01
Abcd4O89016 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Abcd4O89016 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Abcd4O89016 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Abcd4O89016 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Abcd4O89016 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.13■□□□□ 0.01
Abcd4O89016 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Abcd4O89016 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abcd4O89016 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Abcd4O89016 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Abcd4O89016 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.12■□□□□ 0.01
Abcd4O89016 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.12■□□□□ 0.01
Abcd4O89016 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.12■□□□□ 0.01
Abcd4O89016 Mir8112-201ENSMUST00000184382 131 ntBASIC15.12■□□□□ 0.01
Abcd4O89016 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.12■□□□□ 0.01
Abcd4O89016 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.12■□□□□ 0.01
Abcd4O89016 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abcd4O89016 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Abcd4O89016 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Gm7284-201ENSMUST00000131667 944 ntBASIC15.11■□□□□ 0.01
Abcd4O89016 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.11■□□□□ 0.01
Abcd4O89016 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Gm5587-201ENSMUST00000206270 674 ntBASIC15.11■□□□□ 0.01
Abcd4O89016 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Abcd4O89016 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Abcd4O89016 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abcd4O89016 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abcd4O89016 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms