Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Hdac3O88895 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Hdac3O88895 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac3O88895 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac3O88895 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac3O88895 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac3O88895 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.95□□□□□ -0.02
Hdac3O88895 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.95□□□□□ -0.02
Hdac3O88895 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Hdac3O88895 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.95□□□□□ -0.02
Hdac3O88895 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.95□□□□□ -0.02
Hdac3O88895 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.95□□□□□ -0.02
Hdac3O88895 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hdac3O88895 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Hdac3O88895 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac3O88895 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hdac3O88895 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hdac3O88895 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.94□□□□□ -0.02
Hdac3O88895 Gm37025-201ENSMUST00000195159 829 ntBASIC14.94□□□□□ -0.02
Hdac3O88895 Timm23-208ENSMUST00000226683 750 ntBASIC14.94□□□□□ -0.02
Hdac3O88895 Odf3b-204ENSMUST00000227834 930 ntBASIC14.94□□□□□ -0.02
Hdac3O88895 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Hdac3O88895 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hdac3O88895 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Hdac3O88895 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hdac3O88895 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hdac3O88895 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.93□□□□□ -0.02
Hdac3O88895 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Hdac3O88895 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Hdac3O88895 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.93□□□□□ -0.02
Hdac3O88895 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.93□□□□□ -0.02
Hdac3O88895 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.93□□□□□ -0.02
Hdac3O88895 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.93□□□□□ -0.02
Hdac3O88895 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Hdac3O88895 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.93□□□□□ -0.02
Hdac3O88895 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hdac3O88895 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Hdac3O88895 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hdac3O88895 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.92□□□□□ -0.02
Hdac3O88895 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms