Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Gm14140-201ENSMUST00000119999 995 ntBASIC18.22■□□□□ 0.51
Slc6a20bO88575 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.22■□□□□ 0.51
Slc6a20bO88575 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a20bO88575 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Gm9727-201ENSMUST00000161387 555 ntBASIC18.21■□□□□ 0.51
Slc6a20bO88575 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.21■□□□□ 0.51
Slc6a20bO88575 Gm10576-201ENSMUST00000191927 825 ntBASIC18.21■□□□□ 0.51
Slc6a20bO88575 Gm6089-201ENSMUST00000197666 938 ntBASIC18.21■□□□□ 0.51
Slc6a20bO88575 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Slc6a20bO88575 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.2■□□□□ 0.5
Slc6a20bO88575 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a20bO88575 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Auts2-212ENSMUST00000178555 309 ntBASIC18.19■□□□□ 0.5
Slc6a20bO88575 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.19■□□□□ 0.5
Slc6a20bO88575 AV026068-213ENSMUST00000223675 1171 ntBASIC18.19■□□□□ 0.5
Slc6a20bO88575 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.19■□□□□ 0.5
Slc6a20bO88575 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a20bO88575 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Gm27628-201ENSMUST00000184911 107 ntBASIC18.18■□□□□ 0.5
Slc6a20bO88575 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
Slc6a20bO88575 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.18■□□□□ 0.5
Slc6a20bO88575 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a20bO88575 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms