Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cops3O88543 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.01□□□□□ -0.01
Cops3O88543 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cops3O88543 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15□□□□□ -0.01
Cops3O88543 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cops3O88543 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Cops3O88543 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15□□□□□ -0.01
Cops3O88543 Gm20049-201ENSMUST00000219950 730 ntBASIC15□□□□□ -0.01
Cops3O88543 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cops3O88543 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cops3O88543 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops3O88543 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.99□□□□□ -0.01
Cops3O88543 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.99□□□□□ -0.01
Cops3O88543 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cops3O88543 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cops3O88543 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops3O88543 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.98□□□□□ -0.01
Cops3O88543 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.98□□□□□ -0.01
Cops3O88543 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cops3O88543 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.98□□□□□ -0.01
Cops3O88543 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.98□□□□□ -0.01
Cops3O88543 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.98□□□□□ -0.01
Cops3O88543 Gm43183-201ENSMUST00000200632 547 ntBASIC14.98□□□□□ -0.01
Cops3O88543 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.98□□□□□ -0.01
Cops3O88543 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cops3O88543 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops3O88543 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.98□□□□□ -0.01
Cops3O88543 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Cops3O88543 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.98□□□□□ -0.01
Cops3O88543 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cops3O88543 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cops3O88543 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cops3O88543 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.97□□□□□ -0.01
Cops3O88543 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.97□□□□□ -0.01
Cops3O88543 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cops3O88543 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops3O88543 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms