Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Nid2O88322 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nid2O88322 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nid2O88322 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.75■■□□□ 1.07
Nid2O88322 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nid2O88322 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nid2O88322 Gm27628-201ENSMUST00000184911 107 ntBASIC21.75■■□□□ 1.07
Nid2O88322 Gm27397-201ENSMUST00000184997 107 ntBASIC21.75■■□□□ 1.07
Nid2O88322 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.75■■□□□ 1.07
Nid2O88322 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nid2O88322 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nid2O88322 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Nid2O88322 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nid2O88322 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nid2O88322 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.75■■□□□ 1.07
Nid2O88322 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Nid2O88322 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Nid2O88322 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Nid2O88322 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Nid2O88322 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nid2O88322 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.74■■□□□ 1.07
Nid2O88322 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.73■■□□□ 1.07
Nid2O88322 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.73■■□□□ 1.07
Nid2O88322 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 Gm10175-201ENSMUST00000086013 645 ntBASIC21.73■■□□□ 1.07
Nid2O88322 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Nid2O88322 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nid2O88322 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.72■■□□□ 1.07
Nid2O88322 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC21.72■■□□□ 1.07
Nid2O88322 Gm25911-201ENSMUST00000157621 56 ntBASIC21.72■■□□□ 1.07
Nid2O88322 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nid2O88322 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nid2O88322 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nid2O88322 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nid2O88322 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Nid2O88322 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nid2O88322 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nid2O88322 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nid2O88322 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.72■■□□□ 1.07
Nid2O88322 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nid2O88322 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nid2O88322 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nid2O88322 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nid2O88322 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nid2O88322 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nid2O88322 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nid2O88322 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Nid2O88322 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.7■■□□□ 1.07
Nid2O88322 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Nid2O88322 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
Nid2O88322 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nid2O88322 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.7■■□□□ 1.06
Nid2O88322 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nid2O88322 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nid2O88322 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nid2O88322 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nid2O88322 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.7■■□□□ 1.06
Nid2O88322 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nid2O88322 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nid2O88322 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC21.7■■□□□ 1.06
Nid2O88322 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nid2O88322 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nid2O88322 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Nid2O88322 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nid2O88322 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nid2O88322 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Nid2O88322 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nid2O88322 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.69■■□□□ 1.06
Nid2O88322 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nid2O88322 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nid2O88322 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.68■■□□□ 1.06
Nid2O88322 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nid2O88322 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nid2O88322 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nid2O88322 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Nid2O88322 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.68■■□□□ 1.06
Nid2O88322 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.68■■□□□ 1.06
Nid2O88322 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nid2O88322 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.68■■□□□ 1.06
Nid2O88322 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nid2O88322 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Nid2O88322 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Nid2O88322 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms