Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim3O70209 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim3O70209 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim3O70209 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.19■□□□□ 0.02
Pdlim3O70209 Gm12933-201ENSMUST00000120203 872 ntBASIC15.19■□□□□ 0.02
Pdlim3O70209 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.19■□□□□ 0.02
Pdlim3O70209 Gm24841-201ENSMUST00000158676 357 ntBASIC15.19■□□□□ 0.02
Pdlim3O70209 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pdlim3O70209 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim3O70209 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim3O70209 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pdlim3O70209 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pdlim3O70209 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim3O70209 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim3O70209 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.18■□□□□ 0.02
Pdlim3O70209 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pdlim3O70209 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Pdlim3O70209 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Gm10517-202ENSMUST00000192970 758 ntBASIC15.18■□□□□ 0.02
Pdlim3O70209 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim3O70209 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim3O70209 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim3O70209 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim3O70209 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim3O70209 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Pdlim3O70209 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.16■□□□□ 0.02
Pdlim3O70209 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pdlim3O70209 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pdlim3O70209 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim3O70209 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pdlim3O70209 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms