Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SncaO55042 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.88□□□□□ -0.19
SncaO55042 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.88□□□□□ -0.19
SncaO55042 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.88□□□□□ -0.19
SncaO55042 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.88□□□□□ -0.19
SncaO55042 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SncaO55042 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.87□□□□□ -0.19
SncaO55042 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SncaO55042 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
SncaO55042 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SncaO55042 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.87□□□□□ -0.19
SncaO55042 Gm18666-201ENSMUST00000190039 958 ntBASIC13.87□□□□□ -0.19
SncaO55042 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.87□□□□□ -0.19
SncaO55042 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SncaO55042 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SncaO55042 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SncaO55042 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SncaO55042 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.86□□□□□ -0.19
SncaO55042 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.86□□□□□ -0.19
SncaO55042 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SncaO55042 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.86□□□□□ -0.19
SncaO55042 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.86□□□□□ -0.19
SncaO55042 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SncaO55042 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Gm13216-201ENSMUST00000117145 591 ntBASIC13.85□□□□□ -0.19
SncaO55042 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.85□□□□□ -0.19
SncaO55042 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.85□□□□□ -0.19
SncaO55042 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.85□□□□□ -0.19
SncaO55042 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.85□□□□□ -0.19
SncaO55042 Gm27275-201ENSMUST00000184318 272 ntBASIC13.85□□□□□ -0.19
SncaO55042 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.85□□□□□ -0.19
SncaO55042 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SncaO55042 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SncaO55042 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SncaO55042 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SncaO55042 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms