Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnu1O54982 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnu1O54982 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnu1O54982 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Kcnu1O54982 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnu1O54982 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Kcnu1O54982 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Kcnu1O54982 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Kcnu1O54982 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.82■□□□□ 0.44
Kcnu1O54982 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Gm5417-201ENSMUST00000079706 384 ntBASIC17.82■□□□□ 0.44
Kcnu1O54982 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.82■□□□□ 0.44
Kcnu1O54982 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Kcnu1O54982 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Kcnu1O54982 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.81■□□□□ 0.44
Kcnu1O54982 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.81■□□□□ 0.44
Kcnu1O54982 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Kcnu1O54982 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Kcnu1O54982 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Kcnu1O54982 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
Kcnu1O54982 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.8■□□□□ 0.44
Kcnu1O54982 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Kcnu1O54982 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.8■□□□□ 0.44
Kcnu1O54982 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Kcnu1O54982 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.79■□□□□ 0.44
Kcnu1O54982 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.79■□□□□ 0.44
Kcnu1O54982 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Gm27463-201ENSMUST00000183569 57 ntBASIC17.79■□□□□ 0.44
Kcnu1O54982 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.79■□□□□ 0.44
Kcnu1O54982 Gm7370-201ENSMUST00000219471 767 ntBASIC17.79■□□□□ 0.44
Kcnu1O54982 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Kcnu1O54982 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Kcnu1O54982 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.78■□□□□ 0.44
Kcnu1O54982 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.78■□□□□ 0.44
Kcnu1O54982 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.78■□□□□ 0.44
Kcnu1O54982 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Kcnu1O54982 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Kcnu1O54982 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Kcnu1O54982 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.77■□□□□ 0.44
Kcnu1O54982 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Kcnu1O54982 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms