Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per2O54943 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Per2O54943 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per2O54943 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Per2O54943 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.43■□□□□ 0.38
Per2O54943 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per2O54943 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Per2O54943 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per2O54943 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.43■□□□□ 0.38
Per2O54943 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Per2O54943 Gm5417-201ENSMUST00000079706 384 ntBASIC17.43■□□□□ 0.38
Per2O54943 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Per2O54943 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per2O54943 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Per2O54943 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Per2O54943 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.42■□□□□ 0.38
Per2O54943 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.42■□□□□ 0.38
Per2O54943 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Per2O54943 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Per2O54943 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.41■□□□□ 0.38
Per2O54943 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Per2O54943 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Per2O54943 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.41■□□□□ 0.38
Per2O54943 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Per2O54943 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Per2O54943 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Per2O54943 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.41■□□□□ 0.38
Per2O54943 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Per2O54943 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.4■□□□□ 0.38
Per2O54943 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Per2O54943 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Per2O54943 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Per2O54943 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.4■□□□□ 0.38
Per2O54943 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Per2O54943 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Per2O54943 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Per2O54943 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Per2O54943 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Per2O54943 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.39■□□□□ 0.37
Per2O54943 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.39■□□□□ 0.37
Per2O54943 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Per2O54943 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Per2O54943 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Per2O54943 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Per2O54943 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Per2O54943 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms