Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.36■□□□□ 0.37
Cldn5O54942 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.36■□□□□ 0.37
Cldn5O54942 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.36■□□□□ 0.37
Cldn5O54942 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cldn5O54942 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cldn5O54942 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.35■□□□□ 0.37
Cldn5O54942 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cldn5O54942 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Gm27742-201ENSMUST00000184667 60 ntBASIC17.35■□□□□ 0.37
Cldn5O54942 Gm45328-201ENSMUST00000210942 917 ntBASIC17.35■□□□□ 0.37
Cldn5O54942 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cldn5O54942 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cldn5O54942 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Gm9103-201ENSMUST00000119371 405 ntBASIC17.34■□□□□ 0.37
Cldn5O54942 Olfr129-201ENSMUST00000122318 993 ntBASIC17.34■□□□□ 0.37
Cldn5O54942 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.34■□□□□ 0.37
Cldn5O54942 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.34■□□□□ 0.37
Cldn5O54942 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.34■□□□□ 0.37
Cldn5O54942 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cldn5O54942 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cldn5O54942 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn5O54942 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn5O54942 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn5O54942 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cldn5O54942 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.33■□□□□ 0.36
Cldn5O54942 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.33■□□□□ 0.36
Cldn5O54942 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cldn5O54942 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.32■□□□□ 0.36
Cldn5O54942 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn5O54942 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cldn5O54942 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.32■□□□□ 0.36
Cldn5O54942 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.32■□□□□ 0.36
Cldn5O54942 Gm15794-201ENSMUST00000120182 631 ntBASIC17.32■□□□□ 0.36
Cldn5O54942 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn5O54942 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cldn5O54942 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn5O54942 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.32■□□□□ 0.36
Cldn5O54942 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.32■□□□□ 0.36
Cldn5O54942 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn5O54942 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cldn5O54942 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn5O54942 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.32■□□□□ 0.36
Cldn5O54942 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn5O54942 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cldn5O54942 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn5O54942 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn5O54942 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cldn5O54942 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn5O54942 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn5O54942 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn5O54942 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn5O54942 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn5O54942 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.31■□□□□ 0.36
Cldn5O54942 Gm17807-201ENSMUST00000186869 298 ntBASIC17.31■□□□□ 0.36
Cldn5O54942 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cldn5O54942 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cldn5O54942 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms