Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Smarce1O54941 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Smarce1O54941 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarce1O54941 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smarce1O54941 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.88■□□□□ 0.77
Smarce1O54941 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Smarce1O54941 Gm10698-201ENSMUST00000182663 604 ntBASIC19.88■□□□□ 0.77
Smarce1O54941 Il3ra-202ENSMUST00000223589 738 ntBASIC19.88■□□□□ 0.77
Smarce1O54941 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smarce1O54941 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarce1O54941 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Smarce1O54941 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarce1O54941 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.87■□□□□ 0.77
Smarce1O54941 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.87■□□□□ 0.77
Smarce1O54941 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.87■□□□□ 0.77
Smarce1O54941 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Smarce1O54941 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.87■□□□□ 0.77
Smarce1O54941 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarce1O54941 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarce1O54941 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smarce1O54941 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarce1O54941 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarce1O54941 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.86■□□□□ 0.77
Smarce1O54941 Gm7638-201ENSMUST00000121348 967 ntBASIC19.86■□□□□ 0.77
Smarce1O54941 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smarce1O54941 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.86■□□□□ 0.77
Smarce1O54941 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smarce1O54941 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Smarce1O54941 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarce1O54941 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarce1O54941 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarce1O54941 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Smarce1O54941 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarce1O54941 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarce1O54941 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smarce1O54941 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarce1O54941 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarce1O54941 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smarce1O54941 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.85■□□□□ 0.77
Smarce1O54941 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Smarce1O54941 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Gm12085-201ENSMUST00000119263 940 ntBASIC19.85■□□□□ 0.77
Smarce1O54941 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Smarce1O54941 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Smarce1O54941 Gm18958-201ENSMUST00000174258 762 ntBASIC19.85■□□□□ 0.77
Smarce1O54941 Gm38027-201ENSMUST00000192315 235 ntBASIC19.85■□□□□ 0.77
Smarce1O54941 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Smarce1O54941 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.85■□□□□ 0.77
Smarce1O54941 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.85■□□□□ 0.77
Smarce1O54941 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Smarce1O54941 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarce1O54941 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarce1O54941 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarce1O54941 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Smarce1O54941 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarce1O54941 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms