Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.71□□□□□ -0.05
Dkk1O54908 Gm11539-201ENSMUST00000119837 557 ntBASIC14.71□□□□□ -0.05
Dkk1O54908 Gm13436-201ENSMUST00000120418 567 ntBASIC14.71□□□□□ -0.05
Dkk1O54908 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.71□□□□□ -0.05
Dkk1O54908 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.71□□□□□ -0.05
Dkk1O54908 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Dkk1O54908 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Dkk1O54908 Mir6982-201ENSMUST00000184354 68 ntBASIC14.71□□□□□ -0.05
Dkk1O54908 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.71□□□□□ -0.05
Dkk1O54908 Gm10297-201ENSMUST00000207136 651 ntBASIC14.71□□□□□ -0.05
Dkk1O54908 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Dkk1O54908 Gm45701-201ENSMUST00000212049 235 ntBASIC14.71□□□□□ -0.05
Dkk1O54908 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC14.71□□□□□ -0.05
Dkk1O54908 AC117797.1-201ENSMUST00000223977 695 ntBASIC14.71□□□□□ -0.05
Dkk1O54908 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Dkk1O54908 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Dkk1O54908 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Dkk1O54908 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Dkk1O54908 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Dkk1O54908 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Dkk1O54908 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Dkk1O54908 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.71□□□□□ -0.06
Dkk1O54908 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Dkk1O54908 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Dkk1O54908 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Dkk1O54908 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Dkk1O54908 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Dkk1O54908 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Dkk1O54908 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Dkk1O54908 Mir706-201ENSMUST00000102262 84 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Gm15565-201ENSMUST00000118890 427 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 Gm13559-201ENSMUST00000120476 863 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Dkk1O54908 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.7□□□□□ -0.06
Dkk1O54908 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 Gm45525-201ENSMUST00000210800 389 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 AC132384.10-201ENSMUST00000217862 1204 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 AC131743.3-201ENSMUST00000222099 662 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Dkk1O54908 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Dkk1O54908 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.7□□□□□ -0.06
Dkk1O54908 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Dkk1O54908 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.69□□□□□ -0.06
Dkk1O54908 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Dkk1O54908 Gm34272-201ENSMUST00000208886 253 ntBASIC14.69□□□□□ -0.06
Dkk1O54908 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC14.69□□□□□ -0.06
Dkk1O54908 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC14.69□□□□□ -0.06
Dkk1O54908 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.69□□□□□ -0.06
Dkk1O54908 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.69□□□□□ -0.06
Dkk1O54908 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Dkk1O54908 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Dkk1O54908 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Dkk1O54908 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.68□□□□□ -0.06
Dkk1O54908 Gm43799-201ENSMUST00000201845 579 ntBASIC14.68□□□□□ -0.06
Dkk1O54908 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Dkk1O54908 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms