Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.39□□□□□ -0.11
DffbO54788 Gm37292-201ENSMUST00000192062 758 ntBASIC14.39□□□□□ -0.11
DffbO54788 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.39□□□□□ -0.11
DffbO54788 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Gm10602-201ENSMUST00000098239 609 ntBASIC14.39□□□□□ -0.11
DffbO54788 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.39□□□□□ -0.11
DffbO54788 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DffbO54788 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
DffbO54788 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
DffbO54788 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.38□□□□□ -0.11
DffbO54788 Gm10517-202ENSMUST00000192970 758 ntBASIC14.38□□□□□ -0.11
DffbO54788 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
DffbO54788 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DffbO54788 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DffbO54788 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DffbO54788 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DffbO54788 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.37□□□□□ -0.11
DffbO54788 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
DffbO54788 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.37□□□□□ -0.11
DffbO54788 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DffbO54788 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DffbO54788 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
DffbO54788 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
DffbO54788 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
DffbO54788 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
DffbO54788 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.36□□□□□ -0.11
DffbO54788 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
DffbO54788 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
DffbO54788 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.36□□□□□ -0.11
DffbO54788 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Gm12382-201ENSMUST00000122005 922 ntBASIC14.36□□□□□ -0.11
DffbO54788 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
DffbO54788 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
DffbO54788 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.35□□□□□ -0.11
DffbO54788 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DffbO54788 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DffbO54788 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms