Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.97■□□□□ 0.47
Nr1i3O35627 Gm29257-201ENSMUST00000186115 639 ntBASIC17.97■□□□□ 0.47
Nr1i3O35627 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.97■□□□□ 0.47
Nr1i3O35627 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nr1i3O35627 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nr1i3O35627 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Nr1i3O35627 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nr1i3O35627 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nr1i3O35627 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.96■□□□□ 0.47
Nr1i3O35627 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.96■□□□□ 0.47
Nr1i3O35627 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nr1i3O35627 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.96■□□□□ 0.47
Nr1i3O35627 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nr1i3O35627 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nr1i3O35627 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nr1i3O35627 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nr1i3O35627 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nr1i3O35627 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.96■□□□□ 0.47
Nr1i3O35627 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nr1i3O35627 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Nr1i3O35627 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nr1i3O35627 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.95■□□□□ 0.46
Nr1i3O35627 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.95■□□□□ 0.46
Nr1i3O35627 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Nr1i3O35627 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Nr1i3O35627 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.95■□□□□ 0.46
Nr1i3O35627 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Nr1i3O35627 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nr1i3O35627 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.95■□□□□ 0.46
Nr1i3O35627 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.94■□□□□ 0.46
Nr1i3O35627 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Nr1i3O35627 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nr1i3O35627 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nr1i3O35627 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.94■□□□□ 0.46
Nr1i3O35627 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.94■□□□□ 0.46
Nr1i3O35627 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.94■□□□□ 0.46
Nr1i3O35627 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.94■□□□□ 0.46
Nr1i3O35627 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nr1i3O35627 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1i3O35627 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nr1i3O35627 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.93■□□□□ 0.46
Nr1i3O35627 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nr1i3O35627 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1i3O35627 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nr1i3O35627 Gm13186-201ENSMUST00000118031 316 ntBASIC17.92■□□□□ 0.46
Nr1i3O35627 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 Gm27463-201ENSMUST00000183569 57 ntBASIC17.92■□□□□ 0.46
Nr1i3O35627 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.92■□□□□ 0.46
Nr1i3O35627 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1i3O35627 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms