Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Stx1aO35526 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Stx1aO35526 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Stx1aO35526 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Gm37179-201ENSMUST00000194862 823 ntBASIC18.84■□□□□ 0.61
Stx1aO35526 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Stx1aO35526 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Stx1aO35526 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Stx1aO35526 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1aO35526 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Stx1aO35526 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.83■□□□□ 0.61
Stx1aO35526 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1aO35526 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Stx1aO35526 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Stx1aO35526 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.83■□□□□ 0.6
Stx1aO35526 Gm37025-201ENSMUST00000195159 829 ntBASIC18.83■□□□□ 0.6
Stx1aO35526 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.83■□□□□ 0.6
Stx1aO35526 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Stx1aO35526 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stx1aO35526 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stx1aO35526 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.82■□□□□ 0.6
Stx1aO35526 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Stx1aO35526 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Stx1aO35526 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1aO35526 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.81■□□□□ 0.6
Stx1aO35526 Gm27275-201ENSMUST00000184318 272 ntBASIC18.81■□□□□ 0.6
Stx1aO35526 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Stx1aO35526 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Stx1aO35526 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1aO35526 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.8■□□□□ 0.6
Stx1aO35526 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.8■□□□□ 0.6
Stx1aO35526 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.8■□□□□ 0.6
Stx1aO35526 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.8■□□□□ 0.6
Stx1aO35526 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Stx1aO35526 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1aO35526 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1aO35526 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1aO35526 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Stx1aO35526 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1aO35526 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1aO35526 Gm27000-201ENSMUST00000182943 842 ntBASIC18.79■□□□□ 0.6
Stx1aO35526 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms