Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Gm10138-203ENSMUST00000206952 366 ntBASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shisa8J3QNX5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Gm42569-201ENSMUST00000200539 472 ntBASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shisa8J3QNX5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shisa8J3QNX5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.27■□□□□ 0.04
Shisa8J3QNX5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shisa8J3QNX5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa8J3QNX5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa8J3QNX5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Shisa8J3QNX5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shisa8J3QNX5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Gm4968-201ENSMUST00000071458 858 ntBASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms