Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sgo2bJ3QMK1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sgo2bJ3QMK1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Gm5417-201ENSMUST00000079706 384 ntBASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sgo2bJ3QMK1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sgo2bJ3QMK1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms