Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Gm12896-201ENSMUST00000118430 226 ntBASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm21818J3KMS6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Gm10653-202ENSMUST00000139570 835 ntBASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm21818J3KMS6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Dio3-201ENSMUST00000097228 1449 ntBASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Gm20760-201ENSMUST00000179197 648 ntBASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Gm37856-201ENSMUST00000191634 999 ntBASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm21818J3KMS6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm21818J3KMS6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm21818J3KMS6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gm21818J3KMS6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm21818J3KMS6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms