Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Actl10-202ENSMUST00000226583 1501 ntBASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chrna9G3X8Z7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Gm11539-201ENSMUST00000119837 557 ntBASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Gm5417-201ENSMUST00000079706 384 ntBASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chrna9G3X8Z7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Chrna9G3X8Z7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chrna9G3X8Z7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Gm44450-201ENSMUST00000199528 114 ntBASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chrna9G3X8Z7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.93■□□□□ 0.46
Chrna9G3X8Z7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms