Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh11xF6ZNL5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh11xF6ZNL5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Gm16061-201ENSMUST00000122167 857 ntBASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh11xF6ZNL5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Gm45058-201ENSMUST00000205810 766 ntBASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh11xF6ZNL5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh11xF6ZNL5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh11xF6ZNL5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh11xF6ZNL5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh11xF6ZNL5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms