Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.39■□□□□ 0.53
R3hdm1E9Q9Q2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Gm2651-201ENSMUST00000203560 838 ntBASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
R3hdm1E9Q9Q2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3hdm1E9Q9Q2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3hdm1E9Q9Q2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Idnk-204ENSMUST00000226010 1898 ntBASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3hdm1E9Q9Q2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3hdm1E9Q9Q2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms