Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb9E9Q5G2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb9E9Q5G2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb9E9Q5G2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb9E9Q5G2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb9E9Q5G2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
Pcdhb9E9Q5G2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb9E9Q5G2 Gm15794-201ENSMUST00000120182 631 ntBASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb9E9Q5G2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Gm14859-201ENSMUST00000117752 357 ntBASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb9E9Q5G2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Olfr129-201ENSMUST00000122318 993 ntBASIC19.62■□□□□ 0.73
Pcdhb9E9Q5G2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms