Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Gm27000-201ENSMUST00000182943 842 ntBASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Gm18669-201ENSMUST00000216049 778 ntBASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh17E9PXF0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh17E9PXF0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh17E9PXF0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Gm27357-201ENSMUST00000183754 135 ntBASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Gm27742-201ENSMUST00000184667 60 ntBASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh17E9PXF0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh17E9PXF0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Gm45328-201ENSMUST00000210942 917 ntBASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms