Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Mir8112-201ENSMUST00000184382 131 ntBASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm28043E0CXC2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm28043E0CXC2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm28043E0CXC2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.77■□□□□ 0.28
Gm28043E0CXC2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.77■□□□□ 0.27
Gm28043E0CXC2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Gm28043E0CXC2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Gm28043E0CXC2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm28043E0CXC2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gm28043E0CXC2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Gm28043E0CXC2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms